STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT34280.1Monosaccharide ABC transporter substrate-binding protein, CUT2 family. (403 aa)    
Predicted Functional Partners:
SDT34312.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
SDT34348.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.966
SDT34373.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 
 0.926
SDT34246.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
    0.897
SDT34399.1
Predicted dehydrogenase.
 
    0.886
SDT34424.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
    0.765
SDT34216.1
Sugar phosphate isomerase/epimerase.
 
    0.743
SDR88710.1
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.662
SDT29208.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  
 
 0.542
SDR86005.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.464
Your Current Organism:
Microterricola viridarii
NCBI taxonomy Id: 412690
Other names: DSM 21772, JCM 15926, M. viridarii, Microterricola viridarii Matsumoto et al. 2008, NBRC 102123, NRRL B-24538, actinobacterium KV-677, strain KV-677
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