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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBKEGG: tcx:Tcr_1825 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; Belongs to the prokaryotic GSH synthase family. (320 aa)    
Predicted Functional Partners:
Rmag_0290
NADPH-glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tcx:Tcr_0140 glutathione reductase.
  
  
 0.943
pepA
Aminopeptidase A, Metallo peptidase, MEROPS family M17; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.940
gshA
TIGRFAM: glutamate--cysteine ligase; KEGG: hch:HCH_06422 glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
   
 
 0.936
Rmag_0325
PFAM: Glutathione S-transferase, N-terminal domain; KEGG: tcx:Tcr_1309 glutathione S-transferase-like.
    
 0.901
Rmag_0440
TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: noc:Noc_1314 peptidase M, neutral zinc metallopeptidase, zinc-binding site.
     
 0.901
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.482
Rmag_0389
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: tbd:Tbd_2499 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
  
     0.462
ddl
D-alanine--D-alanine ligase; Cell wall formation.
     
 0.427
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.424
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
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