STRINGSTRING
pgk protein (Ruthia magnifica) - STRING interaction network
"pgk" - Phosphoglycerate kinase in Ruthia magnifica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgkPhosphoglycerate kinase (391 aa)    
Predicted Functional Partners:
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
 
  0.999
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (248 aa)
  0.999
Rmag_0063
Glyceraldehyde-3-phosphate dehydrogenase (331 aa)
 
  0.999
Rmag_0067
Fructose-bisphosphate aldolase (353 aa)
   
  0.999
Rmag_0066
Pyruvate kinase (480 aa)
 
  0.998
pgi
Glucose-6-phosphate isomerase (411 aa)
   
   
  0.997
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (512 aa)
   
 
  0.994
Rmag_0701
Ribulose bisphosphate carboxylase (460 aa)
       
  0.982
Rmag_0062
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (661 aa)
 
 
  0.901
Rmag_1018
Glutamate synthase (ferredoxin) (1499 aa)
   
   
  0.901
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica, C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica, Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica, Ruthia magnifica str. Cm (Calyptogena magnifica)
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