node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplM | rplQ | Rmag_0936 | Rmag_0191 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | 0.997 |
rplM | rplU | Rmag_0936 | Rmag_0919 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplM | rpmF | Rmag_0936 | Rmag_0485 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.996 |
rplM | rpmI | Rmag_0936 | Rmag_0646 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L35; KEGG: ilo:IL1397 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.996 |
rplM | rpsD | Rmag_0936 | Rmag_0189 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
rplM | rpsK | Rmag_0936 | Rmag_0188 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.997 |
rplM | rpsM | Rmag_0936 | Rmag_0187 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.997 |
rplM | rpsO | Rmag_0936 | Rmag_0293 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplM | rpsT | Rmag_0936 | Rmag_0749 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.997 |
rplM | rpsU | Rmag_0936 | Rmag_0192 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.995 |
rplQ | rplM | Rmag_0191 | Rmag_0936 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplQ | rplU | Rmag_0191 | Rmag_0919 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.996 |
rplQ | rpmF | Rmag_0191 | Rmag_0485 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.996 |
rplQ | rpmI | Rmag_0191 | Rmag_0646 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | PFAM: ribosomal protein L35; KEGG: ilo:IL1397 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.993 |
rplQ | rpsD | Rmag_0191 | Rmag_0189 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
rplQ | rpsK | Rmag_0191 | Rmag_0188 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplQ | rpsM | Rmag_0191 | Rmag_0187 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rplQ | rpsO | Rmag_0191 | Rmag_0293 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
rplQ | rpsT | Rmag_0191 | Rmag_0749 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.989 |
rplQ | rpsU | Rmag_0191 | Rmag_0192 | PFAM: ribosomal protein L17; KEGG: ppr:PBPRA0346 putative ribosomal protein L17. | PFAM: ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.994 |