Rmag_0197 protein (Ruthia magnifica) - STRING interaction network

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Rmag_0197

Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. (362 aa)

Predicted Functional Partners:

dapB

0.604

Rmag_0196

0.563

Rmag_0549

0.519

Rmag_1018

0.513

metG

0.437

Rmag_0134

0.425

lptD

0.421

orn

0.416

Rmag_0463

0.405

Your Current Organism:

Ruthia magnifica

NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rmag_0134	Rmag_0197	Rmag_0134	Rmag_0197	KEGG: pfl:PFL_5441 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.425
Rmag_0134	lptD	Rmag_0134	Rmag_0535	KEGG: pfl:PFL_5441 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.	Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.	0.585
Rmag_0196	Rmag_0197	Rmag_0196	Rmag_0197	KEGG: noc:Noc_2728 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.563
Rmag_0197	Rmag_0134	Rmag_0197	Rmag_0134	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	KEGG: pfl:PFL_5441 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.	0.425
Rmag_0197	Rmag_0196	Rmag_0197	Rmag_0196	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	KEGG: noc:Noc_2728 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.	0.563
Rmag_0197	Rmag_0463	Rmag_0197	Rmag_0463	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	PFAM: SH3, type 3 domain protein; KEGG: tcx:Tcr_1504 SH3-like region.	0.405
Rmag_0197	Rmag_0549	Rmag_0197	Rmag_0549	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	Bis(5'nucleosyl)-tetraphosphatase, ApaH; KEGG: tbd:Tbd_0168 bis(5'-nucleosyl)-tetraphosphatase (symmetrical); TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase.	0.519
Rmag_0197	Rmag_1018	Rmag_0197	Rmag_1018	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rba:RB5654 glutamate synthase [NADPH] large chain.	0.513
Rmag_0197	dapB	Rmag_0197	Rmag_0828	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	0.604
Rmag_0197	lptD	Rmag_0197	Rmag_0535	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.	0.421
Rmag_0197	metG	Rmag_0197	Rmag_0570	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.437
Rmag_0197	orn	Rmag_0197	Rmag_0111	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	Exonuclease, RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.	0.416
Rmag_0463	Rmag_0197	Rmag_0463	Rmag_0197	PFAM: SH3, type 3 domain protein; KEGG: tcx:Tcr_1504 SH3-like region.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.405
Rmag_0549	Rmag_0197	Rmag_0549	Rmag_0197	Bis(5'nucleosyl)-tetraphosphatase, ApaH; KEGG: tbd:Tbd_0168 bis(5'-nucleosyl)-tetraphosphatase (symmetrical); TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.519
Rmag_1018	Rmag_0197	Rmag_1018	Rmag_0197	PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rba:RB5654 glutamate synthase [NADPH] large chain.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.513
dapB	Rmag_0197	Rmag_0828	Rmag_0197	Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.604
lptD	Rmag_0134	Rmag_0535	Rmag_0134	Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.	KEGG: pfl:PFL_5441 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta.	0.585
lptD	Rmag_0197	Rmag_0535	Rmag_0197	Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.421
metG	Rmag_0197	Rmag_0570	Rmag_0197	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.437
orn	Rmag_0197	Rmag_0111	Rmag_0197	Exonuclease, RNase T and DNA polymerase III; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.	Polynucleotide adenylyltransferase region; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.	0.416

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