close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmag_0214Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: vvy:VV0994 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Rmag_0215
KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein.
 
    0.954
Rmag_0216
PFAM: protein of unknown function DUF1538; KEGG: vpa:VP0812 hypothetical protein.
 
     0.946
Rmag_0217
PFAM: protein of unknown function DUF1538; KEGG: cps:CPS_1953 hypothetical protein.
 
     0.946
Rmag_0218
Aminodeoxychorismate lyase apoprotein; PFAM: aminotransferase, class IV; KEGG: noc:Noc_1662 aminotransferase, class IV.
       0.534
Rmag_0213
KEGG: tcx:Tcr_0450 hypothetical protein.
       0.526
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.521
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.