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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmag_0215KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein. (116 aa)    
Predicted Functional Partners:
Rmag_0214
Putative signal-transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: vvy:VV0994 hypothetical protein.
 
    0.954
Rmag_0216
PFAM: protein of unknown function DUF1538; KEGG: vpa:VP0812 hypothetical protein.
 
     0.948
Rmag_0217
PFAM: protein of unknown function DUF1538; KEGG: cps:CPS_1953 hypothetical protein.
 
     0.948
Rmag_0277
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cps:CPS_3995 ammonium transporter.
  
 
 0.820
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.611
Rmag_1033
Hypothetical protein.
    
 
 0.608
Rmag_1018
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rba:RB5654 glutamate synthase [NADPH] large chain.
     
 0.575
Rmag_0218
Aminodeoxychorismate lyase apoprotein; PFAM: aminotransferase, class IV; KEGG: noc:Noc_1662 aminotransferase, class IV.
       0.534
Rmag_0213
KEGG: tcx:Tcr_0450 hypothetical protein.
       0.526
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.519
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
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