STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmag_0722KEGG: noc:Noc_2908 hypothetical protein. (130 aa)    
Predicted Functional Partners:
Rmag_0115
KEGG: tbd:Tbd_2558 hypothetical protein.
  
     0.774
Rmag_0269
Hypothetical protein.
  
     0.773
Rmag_0723
Cell division and transport-associated protein TolA; KEGG: tcx:Tcr_0897 TolA; TC 2.C.1.2.1.
       0.773
tolR
Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
       0.773
Rmag_0725
Cell division and transport-associated protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ilo:IL1083 TonB system biopolymer transport component; TC 2.C.1.2.1.
       0.773
Rmag_1033
Hypothetical protein.
  
     0.773
Rmag_0331
Putative prophage repressor; PFAM: peptidase S24, S26A and S26B; KEGG: tbd:Tbd_1516 hypothetical protein.
  
     0.770
Rmag_1010
KEGG: tbd:Tbd_2490 hypothetical protein.
  
     0.770
Rmag_0615
KEGG: tbd:Tbd_2487 hypothetical protein.
  
     0.769
Rmag_0321
Hypothetical protein.
  
     0.768
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.