rpsT protein (Ruthia magnifica) - STRING interaction network

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Score

rpsT

SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (97 aa)

Predicted Functional Partners:

rplU

0.996

rpmB

0.996

rpsO

0.995

rpmF

0.995

rpmA

0.995

rplM

0.995

rpsU

0.994

rpsP

0.994

rpmG

0.994

rpsI

0.993

Your Current Organism:

Ruthia magnifica

NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Rmag_0936	Rmag_0919	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	Rmag_0936	Rmag_0918	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L27; KEGG: vch:VC0436 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplM	rpmB	Rmag_0936	Rmag_0994	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L28; KEGG: sde:Sde_3679 50S ribosomal subunit protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.996
rplM	rpmF	Rmag_0936	Rmag_0485	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmG	Rmag_0936	Rmag_0993	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L33; KEGG: hch:HCH_01018 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplM	rpsI	Rmag_0936	Rmag_0935	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: cps:CPS_4442 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Rmag_0936	Rmag_0293	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.996
rplM	rpsP	Rmag_0936	Rmag_0990	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: lpp:lpp0466 hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplM	rpsT	Rmag_0936	Rmag_0749	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.995
rplM	rpsU	Rmag_0936	Rmag_0192	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.992
rplU	rplM	Rmag_0919	Rmag_0936	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplU	rpmA	Rmag_0919	Rmag_0918	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L27; KEGG: vch:VC0436 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	Rmag_0919	Rmag_0994	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L28; KEGG: sde:Sde_3679 50S ribosomal subunit protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmF	Rmag_0919	Rmag_0485	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: neu:NE1644 probable 50S ribosomal subunit protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.995
rplU	rpmG	Rmag_0919	Rmag_0993	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L33; KEGG: hch:HCH_01018 ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplU	rpsI	Rmag_0919	Rmag_0935	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S9; KEGG: cps:CPS_4442 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.995
rplU	rpsO	Rmag_0919	Rmag_0293	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.992
rplU	rpsP	Rmag_0919	Rmag_0990	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S16; KEGG: lpp:lpp0466 hypothetical protein; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rplU	rpsT	Rmag_0919	Rmag_0749	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.996
rplU	rpsU	Rmag_0919	Rmag_0192	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S21; KEGG: tcx:Tcr_1809 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.994

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