STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmag_0895Hypothetical protein. (216 aa)    
Predicted Functional Partners:
Rmag_0892
KEGG: cpe:CPE0622 hypothetical protein.
       0.541
Rmag_0893
Glycerol-3-phosphate cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; KEGG: msu:MS0658 cytidylyltransferase.
       0.541
Rmag_0894
KEGG: ava:Ava_1042 methyltransferase FkbM.
       0.541
Rmag_0896
Hypothetical protein; KEGG: pub:SAR11_0530 cyclopropane-fatty-acyl-phospholipid synthase (CMAS family).
       0.427
Rmag_0897
KEGG: pmi:PMT9312_1328 hypothetical protein.
       0.427
Rmag_0898
KEGG: mth:MTH1523 glucose-1-phosphate adenylyltransferase related protein.
       0.427
Rmag_0899
KEGG: lmf:LMOf2365_0663 hypothetical protein.
       0.424
Your Current Organism:
Ruthia magnifica
NCBI taxonomy Id: 413404
Other names: C. Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), Candidatus Ruthia magnifica strain Cm (Calyptogena magnifica), Ruthia magnifica str. Cm (Calyptogena magnifica)
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.