STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ45881.1Hypothetical protein. (259 aa)    
Predicted Functional Partners:
SJZ45895.1
Hydroxyacylglutathione hydrolase.
     0.793
SJZ45868.1
CRP/FNR family transcriptional regulator, anaerobic regulatory protein.
 
     0.691
SJZ45995.1
Hypothetical protein.
     0.610
SJZ45903.1
Rhodanese-related sulfurtransferase.
 
    0.582
SJZ52689.1
Glyoxylase, beta-lactamase superfamily II.
    0.547
SJZ58854.1
Glyoxylase, beta-lactamase superfamily II.
    0.488
SJZ45974.1
Thioredoxin 1.
       0.469
SJZ45934.1
Hypothetical protein.
       0.468
SJZ45920.1
Protein of unknown function.
       0.463
SJZ45954.1
Hypothetical protein.
  
    0.463
Your Current Organism:
Sediminibacterium ginsengisoli
NCBI taxonomy Id: 413434
Other names: DSM 22335, JCM 15794, KCTC 12833, S. ginsengisoli, Sediminibacterium ginsengisoli Kim et al. 2013, strain DCY13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.