Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ52951.1 | SJZ54674.1 | SAMN04488132_102457 | SAMN04488132_102521 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | dCTP deaminase. | 0.425 |
SJZ52951.1 | pyrG | SAMN04488132_102457 | SAMN04488132_10719 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.478 |
SJZ54674.1 | SJZ52951.1 | SAMN04488132_102521 | SAMN04488132_102457 | dCTP deaminase. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.425 |
SJZ54674.1 | SJZ54694.1 | SAMN04488132_102521 | SAMN04488132_102522 | dCTP deaminase. | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.600 |
SJZ54674.1 | SKA01880.1 | SAMN04488132_102521 | SAMN04488132_10868 | dCTP deaminase. | Hypothetical protein. | 0.512 |
SJZ54674.1 | SKA18960.1 | SAMN04488132_102521 | SAMN04488132_11452 | dCTP deaminase. | XTP/dITP diphosphohydrolase. | 0.481 |
SJZ54674.1 | dut | SAMN04488132_102521 | SAMN04488132_10466 | dCTP deaminase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.853 |
SJZ54674.1 | ndk | SAMN04488132_102521 | SAMN04488132_11197 | dCTP deaminase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.847 |
SJZ54674.1 | pyrE | SAMN04488132_102521 | SAMN04488132_106166 | dCTP deaminase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.426 |
SJZ54674.1 | pyrG | SAMN04488132_102521 | SAMN04488132_10719 | dCTP deaminase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.843 |
SJZ54674.1 | tdk | SAMN04488132_102521 | SAMN04488132_10863 | dCTP deaminase. | Thymidine kinase. | 0.479 |
SJZ54674.1 | thyA | SAMN04488132_102521 | SAMN04488132_10231 | dCTP deaminase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.554 |
SJZ54694.1 | SJZ54674.1 | SAMN04488132_102522 | SAMN04488132_102521 | Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | dCTP deaminase. | 0.600 |
SKA01880.1 | SJZ54674.1 | SAMN04488132_10868 | SAMN04488132_102521 | Hypothetical protein. | dCTP deaminase. | 0.512 |
SKA18960.1 | SJZ54674.1 | SAMN04488132_11452 | SAMN04488132_102521 | XTP/dITP diphosphohydrolase. | dCTP deaminase. | 0.481 |
SKA18960.1 | dut | SAMN04488132_11452 | SAMN04488132_10466 | XTP/dITP diphosphohydrolase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.422 |
SKA18960.1 | pyrG | SAMN04488132_11452 | SAMN04488132_10719 | XTP/dITP diphosphohydrolase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.475 |
dut | SJZ54674.1 | SAMN04488132_10466 | SAMN04488132_102521 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | dCTP deaminase. | 0.853 |
dut | SKA18960.1 | SAMN04488132_10466 | SAMN04488132_11452 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | XTP/dITP diphosphohydrolase. | 0.422 |
dut | ndk | SAMN04488132_10466 | SAMN04488132_11197 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.929 |
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