Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ32476.1 | SJZ53892.1 | SAMN04488132_10186 | SAMN04488132_102488 | LPS export ABC transporter protein LptC. | Outer membrane lipoprotein-sorting protein. | 0.499 |
SJZ32476.1 | SJZ59176.1 | SAMN04488132_10186 | SAMN04488132_10342 | LPS export ABC transporter protein LptC. | N-acetylmuramoyl-L-alanine amidase. | 0.668 |
SJZ32476.1 | SJZ86892.1 | SAMN04488132_10186 | SAMN04488132_105168 | LPS export ABC transporter protein LptC. | N-acetylmuramoyl-L-alanine amidase. | 0.677 |
SJZ32476.1 | SKA12397.1 | SAMN04488132_10186 | SAMN04488132_11134 | LPS export ABC transporter protein LptC. | Type IX secretion system membrane protein, PorP/SprF family. | 0.426 |
SJZ51145.1 | SJZ59176.1 | SAMN04488132_102373 | SAMN04488132_10342 | Gliding motility-associated C-terminal domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.501 |
SJZ51145.1 | SJZ93814.1 | SAMN04488132_102373 | SAMN04488132_106167 | Gliding motility-associated C-terminal domain-containing protein. | Copper chaperone CopZ. | 0.718 |
SJZ51145.1 | SKA12397.1 | SAMN04488132_102373 | SAMN04488132_11134 | Gliding motility-associated C-terminal domain-containing protein. | Type IX secretion system membrane protein, PorP/SprF family. | 0.643 |
SJZ53892.1 | SJZ32476.1 | SAMN04488132_102488 | SAMN04488132_10186 | Outer membrane lipoprotein-sorting protein. | LPS export ABC transporter protein LptC. | 0.499 |
SJZ53892.1 | SJZ59176.1 | SAMN04488132_102488 | SAMN04488132_10342 | Outer membrane lipoprotein-sorting protein. | N-acetylmuramoyl-L-alanine amidase. | 0.757 |
SJZ53892.1 | SJZ86892.1 | SAMN04488132_102488 | SAMN04488132_105168 | Outer membrane lipoprotein-sorting protein. | N-acetylmuramoyl-L-alanine amidase. | 0.788 |
SJZ59176.1 | SJZ32476.1 | SAMN04488132_10342 | SAMN04488132_10186 | N-acetylmuramoyl-L-alanine amidase. | LPS export ABC transporter protein LptC. | 0.668 |
SJZ59176.1 | SJZ51145.1 | SAMN04488132_10342 | SAMN04488132_102373 | N-acetylmuramoyl-L-alanine amidase. | Gliding motility-associated C-terminal domain-containing protein. | 0.501 |
SJZ59176.1 | SJZ53892.1 | SAMN04488132_10342 | SAMN04488132_102488 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein-sorting protein. | 0.757 |
SJZ59176.1 | SJZ62848.1 | SAMN04488132_10342 | SAMN04488132_103223 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.459 |
SJZ59176.1 | SJZ68000.1 | SAMN04488132_10342 | SAMN04488132_103453 | N-acetylmuramoyl-L-alanine amidase. | Rhomboid family protein. | 0.611 |
SJZ59176.1 | SJZ68041.1 | SAMN04488132_10342 | SAMN04488132_103454 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.611 |
SJZ59176.1 | SJZ86892.1 | SAMN04488132_10342 | SAMN04488132_105168 | N-acetylmuramoyl-L-alanine amidase. | N-acetylmuramoyl-L-alanine amidase. | 0.919 |
SJZ59176.1 | SJZ93814.1 | SAMN04488132_10342 | SAMN04488132_106167 | N-acetylmuramoyl-L-alanine amidase. | Copper chaperone CopZ. | 0.491 |
SJZ59176.1 | SKA10831.1 | SAMN04488132_10342 | SAMN04488132_110122 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.611 |
SJZ59176.1 | SKA12397.1 | SAMN04488132_10342 | SAMN04488132_11134 | N-acetylmuramoyl-L-alanine amidase. | Type IX secretion system membrane protein, PorP/SprF family. | 0.457 |
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