Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ44648.1 | rnhB | SAMN04488132_10256 | SAMN04488132_10349 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.949 |
| SJZ64289.1 | SJZ97531.1 | SAMN04488132_103295 | SAMN04488132_10787 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA topoisomerase-1. | 0.423 |
| SJZ64289.1 | SKA00947.1 | SAMN04488132_103295 | SAMN04488132_10820 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase RecQ. | 0.995 |
| SJZ64289.1 | SKA00983.1 | SAMN04488132_103295 | SAMN04488132_10821 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | UvrD-like helicase C-terminal domain-containing protein. | 0.995 |
| SJZ64289.1 | SKA05570.1 | SAMN04488132_103295 | SAMN04488132_1099 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.998 |
| SJZ64289.1 | SKA13075.1 | SAMN04488132_103295 | SAMN04488132_11179 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.505 |
| SJZ64289.1 | rnhB | SAMN04488132_103295 | SAMN04488132_10349 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.921 |
| SJZ75885.1 | SJZ75921.1 | SAMN04488132_104162 | SAMN04488132_104163 | NADH dehydrogenase subunit G. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
| SJZ75885.1 | acpP | SAMN04488132_104162 | SAMN04488132_101434 | NADH dehydrogenase subunit G. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.988 |
| SJZ75885.1 | rnhB | SAMN04488132_104162 | SAMN04488132_10349 | NADH dehydrogenase subunit G. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.755 |
| SJZ75921.1 | SJZ75885.1 | SAMN04488132_104163 | SAMN04488132_104162 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH dehydrogenase subunit G. | 0.999 |
| SJZ75921.1 | acpP | SAMN04488132_104163 | SAMN04488132_101434 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.987 |
| SJZ75921.1 | rnhB | SAMN04488132_104163 | SAMN04488132_10349 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.747 |
| SJZ97531.1 | SJZ64289.1 | SAMN04488132_10787 | SAMN04488132_103295 | DNA topoisomerase-1. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.423 |
| SJZ97531.1 | SKA00947.1 | SAMN04488132_10787 | SAMN04488132_10820 | DNA topoisomerase-1. | ATP-dependent DNA helicase RecQ. | 0.894 |
| SJZ97531.1 | SKA00983.1 | SAMN04488132_10787 | SAMN04488132_10821 | DNA topoisomerase-1. | UvrD-like helicase C-terminal domain-containing protein. | 0.894 |
| SJZ97531.1 | SKA05570.1 | SAMN04488132_10787 | SAMN04488132_1099 | DNA topoisomerase-1. | Hypothetical protein. | 0.648 |
| SJZ97531.1 | rnhB | SAMN04488132_10787 | SAMN04488132_10349 | DNA topoisomerase-1. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.864 |
| SKA00947.1 | SJZ64289.1 | SAMN04488132_10820 | SAMN04488132_103295 | ATP-dependent DNA helicase RecQ. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.995 |
| SKA00947.1 | SJZ97531.1 | SAMN04488132_10820 | SAMN04488132_10787 | ATP-dependent DNA helicase RecQ. | DNA topoisomerase-1. | 0.894 |
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