Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ46770.1 | SJZ91734.1 | SAMN04488132_102158 | SAMN04488132_10649 | Hypothetical protein. | Starch phosphorylase. | 0.925 |
SJZ46770.1 | SKA06390.1 | SAMN04488132_102158 | SAMN04488132_10957 | Hypothetical protein. | Glycosidase. | 0.581 |
SJZ46770.1 | SKA12973.1 | SAMN04488132_102158 | SAMN04488132_11173 | Hypothetical protein. | 4-alpha-glucanotransferase. | 0.427 |
SJZ46770.1 | glgB | SAMN04488132_102158 | SAMN04488132_10913 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.822 |
SJZ50714.1 | SJZ91734.1 | SAMN04488132_102348 | SAMN04488132_10649 | Starch synthase. | Starch phosphorylase. | 0.860 |
SJZ50714.1 | SKA05479.1 | SAMN04488132_102348 | SAMN04488132_1091 | Starch synthase. | Glucose-1-phosphate adenylyltransferase. | 0.993 |
SJZ50714.1 | SKA06390.1 | SAMN04488132_102348 | SAMN04488132_10957 | Starch synthase. | Glycosidase. | 0.861 |
SJZ50714.1 | SKA12973.1 | SAMN04488132_102348 | SAMN04488132_11173 | Starch synthase. | 4-alpha-glucanotransferase. | 0.901 |
SJZ50714.1 | glgA | SAMN04488132_102348 | SAMN04488132_1092 | Starch synthase. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.954 |
SJZ50714.1 | glgB | SAMN04488132_102348 | SAMN04488132_10913 | Starch synthase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.994 |
SJZ62630.1 | SJZ91734.1 | SAMN04488132_103206 | SAMN04488132_10649 | Putative hydrolase of the HAD superfamily. | Starch phosphorylase. | 0.804 |
SJZ62630.1 | SKA05479.1 | SAMN04488132_103206 | SAMN04488132_1091 | Putative hydrolase of the HAD superfamily. | Glucose-1-phosphate adenylyltransferase. | 0.811 |
SJZ62630.1 | SKA07664.1 | SAMN04488132_103206 | SAMN04488132_109131 | Putative hydrolase of the HAD superfamily. | Phosphoglucomutase. | 0.811 |
SJZ91734.1 | SJZ46770.1 | SAMN04488132_10649 | SAMN04488132_102158 | Starch phosphorylase. | Hypothetical protein. | 0.925 |
SJZ91734.1 | SJZ50714.1 | SAMN04488132_10649 | SAMN04488132_102348 | Starch phosphorylase. | Starch synthase. | 0.860 |
SJZ91734.1 | SJZ62630.1 | SAMN04488132_10649 | SAMN04488132_103206 | Starch phosphorylase. | Putative hydrolase of the HAD superfamily. | 0.804 |
SJZ91734.1 | SKA05479.1 | SAMN04488132_10649 | SAMN04488132_1091 | Starch phosphorylase. | Glucose-1-phosphate adenylyltransferase. | 0.968 |
SJZ91734.1 | SKA06390.1 | SAMN04488132_10649 | SAMN04488132_10957 | Starch phosphorylase. | Glycosidase. | 0.875 |
SJZ91734.1 | SKA07664.1 | SAMN04488132_10649 | SAMN04488132_109131 | Starch phosphorylase. | Phosphoglucomutase. | 0.850 |
SJZ91734.1 | SKA12973.1 | SAMN04488132_10649 | SAMN04488132_11173 | Starch phosphorylase. | 4-alpha-glucanotransferase. | 0.972 |
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