Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ36776.1 | SJZ97802.1 | SAMN04488132_101418 | SAMN04488132_107100 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Cytochrome c554 and c-prime. | 0.437 |
SJZ36776.1 | SJZ97851.1 | SAMN04488132_101418 | SAMN04488132_107102 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Starch-binding associating with outer membrane. | 0.791 |
SJZ36776.1 | SJZ97888.1 | SAMN04488132_101418 | SAMN04488132_107104 | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.465 |
SJZ74880.1 | SJZ97802.1 | SAMN04488132_104119 | SAMN04488132_107100 | Hypothetical protein. | Cytochrome c554 and c-prime. | 0.417 |
SJZ97753.1 | SJZ97774.1 | SAMN04488132_10798 | SAMN04488132_10799 | General stress protein 26. | Hypothetical protein. | 0.693 |
SJZ97753.1 | SJZ97802.1 | SAMN04488132_10798 | SAMN04488132_107100 | General stress protein 26. | Cytochrome c554 and c-prime. | 0.500 |
SJZ97753.1 | SJZ97822.1 | SAMN04488132_10798 | SAMN04488132_107101 | General stress protein 26. | Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. | 0.469 |
SJZ97774.1 | SJZ97753.1 | SAMN04488132_10799 | SAMN04488132_10798 | Hypothetical protein. | General stress protein 26. | 0.693 |
SJZ97774.1 | SJZ97802.1 | SAMN04488132_10799 | SAMN04488132_107100 | Hypothetical protein. | Cytochrome c554 and c-prime. | 0.553 |
SJZ97774.1 | SJZ97822.1 | SAMN04488132_10799 | SAMN04488132_107101 | Hypothetical protein. | Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. | 0.517 |
SJZ97802.1 | SJZ36776.1 | SAMN04488132_107100 | SAMN04488132_101418 | Cytochrome c554 and c-prime. | DNA sulfur modification protein DndE; Belongs to the glycosyl hydrolase 28 family. | 0.437 |
SJZ97802.1 | SJZ74880.1 | SAMN04488132_107100 | SAMN04488132_104119 | Cytochrome c554 and c-prime. | Hypothetical protein. | 0.417 |
SJZ97802.1 | SJZ97753.1 | SAMN04488132_107100 | SAMN04488132_10798 | Cytochrome c554 and c-prime. | General stress protein 26. | 0.500 |
SJZ97802.1 | SJZ97774.1 | SAMN04488132_107100 | SAMN04488132_10799 | Cytochrome c554 and c-prime. | Hypothetical protein. | 0.553 |
SJZ97802.1 | SJZ97822.1 | SAMN04488132_107100 | SAMN04488132_107101 | Cytochrome c554 and c-prime. | Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. | 0.729 |
SJZ97802.1 | SJZ97851.1 | SAMN04488132_107100 | SAMN04488132_107102 | Cytochrome c554 and c-prime. | Starch-binding associating with outer membrane. | 0.475 |
SJZ97802.1 | SJZ97871.1 | SAMN04488132_107100 | SAMN04488132_107103 | Cytochrome c554 and c-prime. | TonB-linked outer membrane protein, SusC/RagA family. | 0.450 |
SJZ97802.1 | SJZ97888.1 | SAMN04488132_107100 | SAMN04488132_107104 | Cytochrome c554 and c-prime. | Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.576 |
SJZ97802.1 | SKA09823.1 | SAMN04488132_107100 | SAMN04488132_11060 | Cytochrome c554 and c-prime. | Hypothetical protein. | 0.412 |
SJZ97822.1 | SJZ97753.1 | SAMN04488132_107101 | SAMN04488132_10798 | Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family. | General stress protein 26. | 0.469 |
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