Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ36473.1 | SJZ39652.1 | SAMN04488132_101401 | SAMN04488132_101587 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SJZ47886.1 | SAMN04488132_101401 | SAMN04488132_102215 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SJZ59253.1 | SAMN04488132_101401 | SAMN04488132_10346 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SJZ64336.1 | SAMN04488132_101401 | SAMN04488132_103298 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.999 |
SJZ36473.1 | SJZ66689.1 | SAMN04488132_101401 | SAMN04488132_103404 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SJZ87355.1 | SAMN04488132_101401 | SAMN04488132_105192 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SJZ88449.1 | SAMN04488132_101401 | SAMN04488132_105239 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SKA11030.1 | SAMN04488132_101401 | SAMN04488132_110135 | Hypothetical protein. | Two component regulator propeller. | 0.856 |
SJZ36473.1 | SKA11034.1 | SAMN04488132_101401 | SAMN04488132_110136 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.916 |
SJZ36473.1 | SKA14695.1 | SAMN04488132_101401 | SAMN04488132_11218 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SJZ39652.1 | SJZ36473.1 | SAMN04488132_101587 | SAMN04488132_101401 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.916 |
SJZ39652.1 | SJZ64336.1 | SAMN04488132_101587 | SAMN04488132_103298 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.957 |
SJZ39652.1 | SKA11030.1 | SAMN04488132_101587 | SAMN04488132_110135 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Two component regulator propeller. | 0.781 |
SJZ39652.1 | SKA14695.1 | SAMN04488132_101587 | SAMN04488132_11218 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | PAS domain S-box-containing protein. | 0.973 |
SJZ47886.1 | SJZ36473.1 | SAMN04488132_102215 | SAMN04488132_101401 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.916 |
SJZ47886.1 | SJZ64336.1 | SAMN04488132_102215 | SAMN04488132_103298 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.957 |
SJZ47886.1 | SKA11030.1 | SAMN04488132_102215 | SAMN04488132_110135 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Two component regulator propeller. | 0.766 |
SJZ47886.1 | SKA14695.1 | SAMN04488132_102215 | SAMN04488132_11218 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | PAS domain S-box-containing protein. | 0.973 |
SJZ59253.1 | SJZ36473.1 | SAMN04488132_10346 | SAMN04488132_101401 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.916 |
SJZ59253.1 | SJZ64336.1 | SAMN04488132_10346 | SAMN04488132_103298 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.957 |
page 1 of 4