Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AAW51_0101 | AAW51_0102 | Hypothetical protein. | Protein phosphatase. | 0.886 |
AAW51_0101 | AAW51_0103 | Hypothetical protein. | Serine/threonine protein kinase PrkC, regulator of stationary phase. | 0.926 |
AAW51_0101 | AAW51_0151 | Hypothetical protein. | Serine/threonine protein kinase. | 0.536 |
AAW51_0101 | AAW51_0218 | Hypothetical protein. | Serine/threonine protein kinase. | 0.772 |
AAW51_0101 | AAW51_0394 | Hypothetical protein. | Serine/threonine protein kinase. | 0.549 |
AAW51_0101 | AAW51_1145 | Hypothetical protein. | Serine/threonine protein kinase. | 0.649 |
AAW51_0101 | AAW51_1436 | Hypothetical protein. | Serine/threonine protein kinase. | 0.661 |
AAW51_0101 | AAW51_2665 | Hypothetical protein. | Serine/threonine protein kinase. | 0.725 |
AAW51_0101 | AAW51_2882 | Hypothetical protein. | Serine/threonine protein kinase. | 0.652 |
AAW51_0101 | AAW51_4423 | Hypothetical protein. | Serine/threonine kinase. | 0.658 |
AAW51_0102 | AAW51_0101 | Protein phosphatase. | Hypothetical protein. | 0.886 |
AAW51_0102 | AAW51_0103 | Protein phosphatase. | Serine/threonine protein kinase PrkC, regulator of stationary phase. | 0.947 |
AAW51_0102 | AAW51_0151 | Protein phosphatase. | Serine/threonine protein kinase. | 0.843 |
AAW51_0102 | AAW51_0218 | Protein phosphatase. | Serine/threonine protein kinase. | 0.840 |
AAW51_0102 | AAW51_0394 | Protein phosphatase. | Serine/threonine protein kinase. | 0.840 |
AAW51_0102 | AAW51_1145 | Protein phosphatase. | Serine/threonine protein kinase. | 0.842 |
AAW51_0102 | AAW51_1436 | Protein phosphatase. | Serine/threonine protein kinase. | 0.842 |
AAW51_0102 | AAW51_2665 | Protein phosphatase. | Serine/threonine protein kinase. | 0.846 |
AAW51_0102 | AAW51_2882 | Protein phosphatase. | Serine/threonine protein kinase. | 0.842 |
AAW51_0102 | AAW51_4423 | Protein phosphatase. | Serine/threonine kinase. | 0.848 |
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