STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAW51_0179Membrane protein. (178 aa)    
Predicted Functional Partners:
AAW51_0178
Copper binding protein, plastocyanin/azurin family.
 
     0.859
AAW51_0177
RNA polymerase sigma factor; SIG3.2; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.578
AAW51_3905
Membrane protein.
  
     0.512
AAW51_0180
FAD-dependent oxidoreductase.
       0.508
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.488
AAW51_1763
Hypothetical protein.
  
     0.465
AAW51_2831
Malto-oligosyltrehalose trehalohydrolase.
   
    0.447
AAW51_3086
Aldehyde dehydrogenase.
  
    0.425
treS
Alpha-amylase.
   
    0.420
AAW51_2584
Hypothetical protein.
  
     0.409
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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