STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAW51_0377Diguanylate cyclase/phosphodiesterase. (686 aa)    
Predicted Functional Partners:
AAW51_5197
Diguanylate cyclase.
 
 
   0.827
AAW51_2454
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.824
AAW51_2808
Chemotaxis protein methyltransferase CheR.
 
 
 0.820
AAW51_5501
Sensory box histidine kinase/response regulator.
 
 
   0.818
AAW51_4519
Sensory box histidine kinase/response regulator.
 
 
 0.812
AAW51_0892
Signal transduction histidine kinase.
 
 
0.805
AAW51_4270
PAS/PAC sensor hybrid histidine kinase.
 
 
0.805
AAW51_3928
Chemotaxis protein methyltransferase CheR.
 
   0.803
AAW51_4243
Phytochrome, two-component sensor histidine kinase.
 
 
 
 0.793
AAW51_3536
Diguanylate cyclase.
  
 
   0.790
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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