STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase (NADPH). (305 aa)    
Predicted Functional Partners:
trxB-2
Thioredoxin reductase.
  
  
0.926
selD
Segregation protein A; Synthesizes selenophosphate from selenide and ATP.
     
 0.911
AAW51_3491
Cystathionine beta-lyase; CTH.
   
 
 0.904
trxB-3
ferredoxin-NADP reductase.
     
 
0.900
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
 
 0.763
trxC
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.756
ybbN
Thioredoxin.
 
 
 0.741
AAW51_3343
Alkyl hydroperoxide reductase.
  
 
 0.726
AAW51_4407
Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.726
AAW51_3308
ABC transporter ATP-binding protein; ABC.CD.A.
 
  
 0.629
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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