STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yscTType III secretion system protein. (272 aa)    
Predicted Functional Partners:
yscR
Type III secretion system protein SsaR.
 
 
 0.986
yscR-2
Type III secretion system protein SsaR.
 
 
 0.986
AAW51_5394
Type III secretion protein HrpO.
 
 
 0.982
AAW51_1122
Aldolase.
 
 
 0.981
yscJ
Type III secretion protein J.
 
 
 0.978
yscJ-2
Type III secretion protein.
 
 
 0.969
yscV
Hypersensitivity response secretion protein hrcV.
 
 
 0.968
yscV-2
Type III secretion protein.
 
 
 0.966
yscT-2
Type III secretion system protein.
  
  
 
0.917
AAW51_5387
Type III secretion protein.
 
  
 0.915
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.