Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAW51_1134 | AAW51_1135 | AAW51_1134 | AAW51_1135 | Type III secretion cytoplasmic protein. | Hypothetical protein. | 0.687 |
AAW51_1134 | AAW51_1138 | AAW51_1134 | AAW51_1138 | Type III secretion cytoplasmic protein. | Type III secretion protein, HrpB1. | 0.555 |
AAW51_1134 | hrpB2 | AAW51_1134 | AAW51_1137 | Type III secretion cytoplasmic protein. | Type III secretion inner rod protein HrpB2. | 0.629 |
AAW51_1134 | yscJ | AAW51_1134 | AAW51_1136 | Type III secretion cytoplasmic protein. | Type III secretion protein J. | 0.943 |
AAW51_1134 | yscN | AAW51_1134 | AAW51_1133 | Type III secretion cytoplasmic protein. | ATP synthase. | 0.969 |
AAW51_1135 | AAW51_1134 | AAW51_1135 | AAW51_1134 | Hypothetical protein. | Type III secretion cytoplasmic protein. | 0.687 |
AAW51_1135 | AAW51_1138 | AAW51_1135 | AAW51_1138 | Hypothetical protein. | Type III secretion protein, HrpB1. | 0.673 |
AAW51_1135 | AAW51_1139 | AAW51_1135 | AAW51_1139 | Hypothetical protein. | Hypothetical protein. | 0.438 |
AAW51_1135 | hrpB2 | AAW51_1135 | AAW51_1137 | Hypothetical protein. | Type III secretion inner rod protein HrpB2. | 0.762 |
AAW51_1135 | yscJ | AAW51_1135 | AAW51_1136 | Hypothetical protein. | Type III secretion protein J. | 0.799 |
AAW51_1135 | yscN | AAW51_1135 | AAW51_1133 | Hypothetical protein. | ATP synthase. | 0.552 |
AAW51_1138 | AAW51_1134 | AAW51_1138 | AAW51_1134 | Type III secretion protein, HrpB1. | Type III secretion cytoplasmic protein. | 0.555 |
AAW51_1138 | AAW51_1135 | AAW51_1138 | AAW51_1135 | Type III secretion protein, HrpB1. | Hypothetical protein. | 0.673 |
AAW51_1138 | AAW51_1139 | AAW51_1138 | AAW51_1139 | Type III secretion protein, HrpB1. | Hypothetical protein. | 0.516 |
AAW51_1138 | hrpB2 | AAW51_1138 | AAW51_1137 | Type III secretion protein, HrpB1. | Type III secretion inner rod protein HrpB2. | 0.708 |
AAW51_1138 | yscJ | AAW51_1138 | AAW51_1136 | Type III secretion protein, HrpB1. | Type III secretion protein J. | 0.663 |
AAW51_1138 | yscN | AAW51_1138 | AAW51_1133 | Type III secretion protein, HrpB1. | ATP synthase. | 0.444 |
AAW51_1139 | AAW51_1135 | AAW51_1139 | AAW51_1135 | Hypothetical protein. | Hypothetical protein. | 0.438 |
AAW51_1139 | AAW51_1138 | AAW51_1139 | AAW51_1138 | Hypothetical protein. | Type III secretion protein, HrpB1. | 0.516 |
AAW51_1139 | hrpB2 | AAW51_1139 | AAW51_1137 | Hypothetical protein. | Type III secretion inner rod protein HrpB2. | 0.457 |
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