STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lldE-2Fe-S oxidoreductase. (240 aa)    
Predicted Functional Partners:
lldF-2
(Fe-S)-binding protein.
 
 0.998
lldF
(Fe-S)-binding protein.
 
 0.993
lldG
L-lactate dehydrogenase complex protein LldG.
 
 
 0.937
lldG-2
Membrane protein.
 
 
 0.937
sdhB
Succinate dehydrogenase; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
 
 0.900
AAW51_2209
Hypothetical protein.
  
  
 0.636
AAW51_1817
IclR family transcriptional regulator.
       0.540
glcD
Glycolate oxidase subunit GlcD.
 
  
 0.486
ascD
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
  
 0.477
glpA
FAD-dependent oxidoreductase.
 
  
 0.448
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.