STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuBTonB-dependent receptor. (613 aa)    
Predicted Functional Partners:
tonB
Energy transducer TonB.
 
 
 
 0.809
tonB-3
Periplasmic protein TonB.
 
 
 
 0.806
AAW51_2414
ABC transporter permease; ABC.FEV.P; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.804
tonB-2
Periplasmic protein TonB.
   
 
 0.729
tolA
Colicin import membrane protein.
   
 
 0.729
AAW51_2048
Hypothetical protein.
   
 
 0.729
parA
Cobyrinic acid a,c-diamide synthase.
    
 
 0.724
parA-2
Chromosome partitioning protein.
    
 
 0.724
AAW51_2548
Energy transducer TonB.
   
 
 0.715
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 
 0.710
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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