STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspGGeneral secretion pathway protein GspG. (143 aa)    
Predicted Functional Partners:
gspF
General secretion pathway protein F.
 
  
 0.945
gspE
General secretion pathway protein E.
 
 
 0.935
gspG-2
General secretion pathway protein GspG.
  
  
 
0.907
AAW51_3040
General secretion pathway protein D.
 
  
 0.898
gspK
General secretion pathway protein K.
 
 
 0.871
gspF-2
General secretion pathway protein GspF.
 
  
 0.870
gspE-3
General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.834
gspD
General secretion pathway protein GspD.
 
  
 0.821
gspJ
General secretion pathway protein GspJ.
  
 
 0.789
AAW51_3034
Hypothetical protein.
       0.773
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.