Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
cysEAcetyltransferase. (164 aa)    
Predicted Functional Partners:
cysK-2
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.985
cysM
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.979
cysK
Cysteine synthase.
  
 0.964
AAW51_3492
Cystathionine beta-synthase.
 
 0.955
AAW51_4226
Serine acetyltransferase.
  
  
 
0.926
cysE-2
Serine acetyltransferase.
  
  
 
0.923
AAW51_1773
Serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.917
AAW51_3491
Cystathionine beta-lyase; CTH.
  
 
 0.868
AAW51_2360
Homoserine dehydrogenase.
  
  
 0.846
serB
Phosphoserine phosphatase.
    
 0.840
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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