STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAW51_3406Short-chain dehydrogenase. (251 aa)    
Predicted Functional Partners:
AAW51_3182
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.702
AAW51_2344
Hypothetical protein.
  
 
 0.681
AAW51_2732
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.608
AAW51_2730
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.602
AAW51_0614
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.588
AAW51_2731
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.587
AAW51_3405
Cell division inhibitor.
  
    0.567
AAW51_3404
Hypothetical protein.
       0.550
ascD
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.506
AAW51_1653
Pteridine reductase; PTR1.
  
     0.471
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.