STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAW51_3744LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (332 aa)    
Predicted Functional Partners:
gluQ
glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
       0.798
AAW51_3743
Quercetin 2,3-dioxygenase; Belongs to the pirin family.
   
   0.594
AAW51_4624
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.502
AAW51_5436
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.469
AAW51_1501
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.461
AAW51_0222
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.459
AAW51_3742
Membrane protein.
       0.440
gcvA
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.439
AAW51_2051
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.436
AAW51_5477
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.434
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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