STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAW51_3968DNA primase/helicase. (767 aa)    
Predicted Functional Partners:
AAW51_3966
isoleucyl-tRNA synthetase.
 
     0.952
AAW51_3961
Hypothetical protein.
 
     0.949
AAW51_3962
Phage related protein.
 
     0.949
AAW51_3963
Hypothetical protein.
 
     0.949
AAW51_3960
Hypothetical protein.
 
     0.945
AAW51_3970
Hypothetical protein.
 
     0.894
AAW51_3971
RNA polymerase subunit sigma.
 
     0.894
AAW51_3969
Phage related protein.
 
     0.892
AAW51_3972
DNA methylase N-4; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.861
AAW51_3957
Elements of external origin.
 
  
 0.825
Your Current Organism:
Polyangium brachysporum
NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.