Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAW51_5390 | AAW51_5391 | AAW51_5390 | AAW51_5391 | Hypothetical protein. | Hypothetical protein. | 0.505 |
AAW51_5390 | yscJ-2 | AAW51_5390 | AAW51_5389 | Hypothetical protein. | Type III secretion protein. | 0.773 |
AAW51_5391 | AAW51_5390 | AAW51_5391 | AAW51_5390 | Hypothetical protein. | Hypothetical protein. | 0.505 |
AAW51_5391 | AAW51_5392 | AAW51_5391 | AAW51_5392 | Hypothetical protein. | Forkhead-associated protein. | 0.458 |
AAW51_5391 | AAW51_5393 | AAW51_5391 | AAW51_5393 | Hypothetical protein. | General secretion pathway protein D. | 0.458 |
AAW51_5391 | AAW51_5394 | AAW51_5391 | AAW51_5394 | Hypothetical protein. | Type III secretion protein HrpO. | 0.458 |
AAW51_5391 | yscJ-2 | AAW51_5391 | AAW51_5389 | Hypothetical protein. | Type III secretion protein. | 0.505 |
AAW51_5391 | yscV-2 | AAW51_5391 | AAW51_5395 | Hypothetical protein. | Type III secretion protein. | 0.414 |
AAW51_5392 | AAW51_5391 | AAW51_5392 | AAW51_5391 | Forkhead-associated protein. | Hypothetical protein. | 0.458 |
AAW51_5392 | AAW51_5393 | AAW51_5392 | AAW51_5393 | Forkhead-associated protein. | General secretion pathway protein D. | 0.859 |
AAW51_5392 | AAW51_5394 | AAW51_5392 | AAW51_5394 | Forkhead-associated protein. | Type III secretion protein HrpO. | 0.869 |
AAW51_5392 | yscJ-2 | AAW51_5392 | AAW51_5389 | Forkhead-associated protein. | Type III secretion protein. | 0.728 |
AAW51_5392 | yscV-2 | AAW51_5392 | AAW51_5395 | Forkhead-associated protein. | Type III secretion protein. | 0.881 |
AAW51_5393 | AAW51_5391 | AAW51_5393 | AAW51_5391 | General secretion pathway protein D. | Hypothetical protein. | 0.458 |
AAW51_5393 | AAW51_5392 | AAW51_5393 | AAW51_5392 | General secretion pathway protein D. | Forkhead-associated protein. | 0.859 |
AAW51_5393 | AAW51_5394 | AAW51_5393 | AAW51_5394 | General secretion pathway protein D. | Type III secretion protein HrpO. | 0.969 |
AAW51_5393 | yscJ-2 | AAW51_5393 | AAW51_5389 | General secretion pathway protein D. | Type III secretion protein. | 0.947 |
AAW51_5393 | yscV-2 | AAW51_5393 | AAW51_5395 | General secretion pathway protein D. | Type III secretion protein. | 0.919 |
AAW51_5394 | AAW51_5391 | AAW51_5394 | AAW51_5391 | Type III secretion protein HrpO. | Hypothetical protein. | 0.458 |
AAW51_5394 | AAW51_5392 | AAW51_5394 | AAW51_5392 | Type III secretion protein HrpO. | Forkhead-associated protein. | 0.869 |
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