Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0093Putative cations transporter; Similar to Bacillus subtilis SapB protein or bsu06650 SWALL:SAPB_BACSU (SWALL:Q45514) (232 aa) fasta scores: E(): 7.7e-13, 28.15 38d in 206 aa, and to Clostridium perfringens probable Mg2+ transport protein cpe0592 SWALL:Q8XMU6 (EMBL:AP003187) (241 aa) fasta scores: E(): 1.2e-27, 39.24 38d in 237 aa. (242 aa)    
Predicted Functional Partners:
mgtA
Mg(2+) transport atpase, P-type 1.
 
 
 0.833
CBO0092
Similar to Clostridium tetani signaling protein ctc01837 SWALL:Q893I5 (EMBL:AE015942) (449 aa) fasta scores: E(): 1.8e-10, 26.93 38d in 427 aa, and to Shewanella oneidensis cyclic nucleotide phosphodiesterase,putative so3556 SWALL:Q8EBG2 (EMBL:AE015792) (420 aa) fasta scores: E(): 3.6e-15, 24.37 38d in 357 aa.
       0.601
mntP
Putative membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
      
 0.594
mntP-2
Putative membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
      
 0.594
gcvP-2
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.
      
 0.568
mgtE
Putative Mg2+ transporter; Acts as a magnesium transporter.
 
   
 0.555
flhB
Flagellar biosynthetic protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.468
CBO0091
Hypothetical protein; No significant database matches.
       0.438
queE
Putative radical SAM-superfamily protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
      
 0.435
queC
Conserved hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
      
 0.435
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.