Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBO0096Putative membrane protein; Similar to Clostridium acetobutylicum membrane protein cap0154 SWALL:Q97TF0 (EMBL:AE001438) (225 aa) fasta scores: E(): 3.1e-26, 39.64 38d in 222 aa, and to Bacillus cereus hypothetical protein bc4207 SWALL:Q818P2 (EMBL:AE017011) (226 aa) fasta scores: E(): 4.2e-06,24.31 38d in 218 aa. (224 aa)    
Predicted Functional Partners:
CBO0097
Similar to Clostridium acetobutylicum predicted transcriptional regulator cap0153 SWALL:Q97TF1 (EMBL:AE001438) (115 aa) fasta scores: E(): 2.3e-29,73.45 38d in 113 aa, and to Clostridium tetani putative transcriptional regulator PadR or ctc00601 SWALL:Q897X0 (EMBL:AE015938) (106 aa) fasta scores: E(): 3.6e-20,52.88 38d in 104 aa.
 
  
 0.937
CBO0098
Conserved hypothetical protein; Similar to Clostridium acetobutylicum Zn-dependent hydrolases of the metallo-beta-lactamase superfamily cac0482 SWALL:Q97LS2 (EMBL:AE007563) (211 aa) fasta scores: E(): 2e-35, 44.07 38d in 211 aa, and to Thermoanaerobacter tengcongensis predicted Zn-dependent hydrolases of the beta-lactamase fold tte2532 SWALL:Q8R787 (EMBL:AE013195) (212 aa) fasta scores: E(): 1.4e-31, 44.5 id in 200 aa.
     
 0.644
nifE1
Nitrogenase iron-molybdenum cofactor biosynthesis protein.
  
     0.466
nifE2
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE.
  
     0.404
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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