Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBO0113Putative glycosyl transferase; Similar to Escherichia coli mannosyltransferase B MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E(): 8.8e-32, 32.55 38d in 384 aa, and to Clostridium tetani mannosyltransferase ctc00272 SWALL:Q899B3 (EMBL:AE015936) (384 aa) fasta scores: E(): 1.5e-84,60.85 38d in 373 aa; Also similar to the nearby CDS, CBO0108, (44.892 ide. in 372 aa overlap). (375 aa)    
Predicted Functional Partners:
CBO0114
Spore coat protein; Similar to Bacillus subtilis YtaA protein SWALL:O34656 (EMBL:Z99119) (357 aa) fasta scores: E(): 1.3e-20, 28.1 38d in 306 aa, and to Clostridium tetani spore coat protein ctc00273 SWALL:Q899B2 (EMBL:AE015936) (337 aa) fasta scores: E(): 8.4e-95, 71.85 38d in 334 aa. Also similar to CBO0112 (32.390 38d), CBO0109 (31.077).
 
  
 0.821
CBO0102
Similar to Escherichia coli mannose-1-phosphate guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51 id in 356 aa, and to Clostridium tetani mannose-6-phosphate isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa) fasta scores: E(): 5.9e-94,70.33 38d in 354 aa.
 
  
 0.620
CBO0109
Spore coat protein; Similar to Bacillus subtilis spore coat protein S CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) fasta scores: E(): 4.6e-06, 19.63 38d in 331 aa, and to Clostridium acetobutylicum spore coat protein CotS related cac2910 SWALL:Q97F43 (EMBL:AE007788) (335 aa) fasta scores: E(): 3.8e-69, 52.25 38d in 333 aa.
 
    0.580
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.567
cotS-2
Putative spore coat protein S.
  
  
 0.539
yabG
Probable peptidase; Similar to Clostridium tetani conserved protein ctc00279 SWALL:Q899A6 (EMBL:AE015936) (300 aa) fasta scores: E(): 3.5e-69, 65.21 38d in 299 aa, and to Clostridium acetobutylicum uncharacterized protein, yabg b.subtilis ortholog cac2905 SWALL:Q97F48 (EMBL:AE007788) (300 aa) fasta scores: E(): 8.1e-69, 61.79 38d in 301 aa.
  
    0.523
CBO2686
Putative sugar transferase.
 
  
 0.509
CBO3093
Phospho-glucosyltransferase.
 
  
 0.498
CBO0112
Spore coat protein; Similar to Bacillus subtilis spore coat protein S CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) fasta scores: E(): 5.4e-11, 25.43 38d in 342 aa, and to Clostridium acetobutylicum spore coat protein CotS related cac2908 SWALL:Q97F45 (EMBL:AE007788) (344 aa) fasta scores: E(): 6.1e-61, 49.84 38d in 331 aa. Also similar to CBO0114 (32.390 38d), CBO0109 (32.537) and to CBO0111 (21.756).
 
    0.490
rmlB
Putative dTDP-glucose 4,6-dehydratase.
 
  
 0.470
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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