STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0280Transcriptional regulator of phosphosugar synthesis; Similar to Bacillus subtilis hth-type transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU (SWALL:P54717) (254 aa) fasta scores: E(): 3.9e-06, 26.17 38d in 256 aa. (253 aa)    
Predicted Functional Partners:
glvA1
Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or Glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 3.5e-140, 77.44 38d in 439 aa; Also similar to CBO0289 (73.69 38d) and CBO0267 (48.19 38d); Also highly similar to CBO0289 (73.69 38d).
 
    0.642
glvA2
Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 7.5e-125, 68.55 38d in 442 aa, and to Escherichia coli probable 6-phospho-alpha-glucosidase GlvG or b3681 SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E(): 7e-59, 72.68 38d in 205 aa; Also similar to CBO0278 (73.69 38d) and CBO0267 (49.21 38d); Also highly similar to CBO0278 (73.69 38d).
 
    0.560
pagL
Probable glycosyl hydrolase; Similar to Klebsiella pneumoniae 6-phospho-alpha-glucosidase aglB SWALL:AGLB_KLEPN (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.3e-79, 47.17 id in 443 aa.
 
    0.548
treB
PTS system, trehalose-specific IIbc component.
 
  
 0.540
licH
6-phospho-beta-glucosidase.
 
    0.507
murQ
Putative phosphosugar binding/isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.466
CBO1344
PTS system, IIbc component.
 
  
 0.454
CBO0277
Similar to Bacillus subtilis PTS system,arbutin-like IIbc component GlvC or GlvCB or Glv-2 or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): 8.6e-61, 36.41 38d in 530 aa, and to Klebsiella pneumoniae PTS system, alpha-glucoside-specific IIbc component AglA SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): 3.3e-59, 35.53 38d in 529 aa; Also highly similar to CBO0288 (53.2 38d).
 
  
 0.444
ptsG
Similar to Bacillus subtilis PTS system,glucose-specific IIabc component PtsG or PtsX or Crr or bsu13890 SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta scores: E(): 3.7e-24, 52.56 38d in 156 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri PTS system, glucose-specific IIa component Crr or Gsr or Iex or Tgs or TreD or b2417 or c2952 or sf2472 or s2618 SWALL:PTGA_ECOLI (SWALL:P08837) (168 aa) fasta scores: E(): 2.1e-22, 42.35 38d in 170 aa.
  
  
 0.441
CBO0288
Similar to Escherichia coli PTS system, maltose and glucose-specific IIabc component MalX or b1621 SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): 1.5e-62, 38.43 38d in 523 aa, and to Bacillus subtilis PTS system, arbutin-like IIbc component GlvC or GlvCB or glv-2 or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): 5.1e-61, 37.73 38d in 530 aa; Also highly similar to CBO0277 (53.2 38d).
 
  
 0.439
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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