Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0297Probable glycosyl transferase; Similar to Escherichia coli bactoprenol glucosyl transferase homolog from prophage cps-53 yfdh or b2351 SWALL:GTRB_ECOLI (SWALL:P77293) (306 aa) fasta scores: E(): 2.1e-39, 40.26 38d in 298 aa. (322 aa)    
Predicted Functional Partners:
CBO0298
Teichoic acid glycosylation protein; Similar to Actinobacillus actinomycetemcomitans dTDP-glucose-4-keto-6-deoxy-D-glucose reductase Fcd SWALL:Q9AQB3 (EMBL:AF213680) (130 aa) fasta scores: E(): 1.3e-05, 30.46 38d in 128 aa, and to Listeria innocua teichoic acid glycosylation protein GtcA SWALL:Q9KJU8 (EMBL:AF160251) (145 aa) fasta scores: E(): 0.0023, 25.58 id in 129 aa.
 
  
 0.938
CBO0299
Putative dolichyl-phosphate-mannose-protein mannosyltransferase; Similar to Streptomyces carzinostaticus subsp. neocarzinostaticus membrane protein SWALL:Q84HC4 (EMBL:AY117439) (720 aa) fasta scores: E(): 2.4e-25,27.37 38d in 767 aa.
 
  
 0.795
CBO2400
Putative transport protein.
 
  
 0.447
cssR
Two-component response regulator; Similar to Bacillus subtilis transcriptional regulatory protein CssR or bsu33010 SWALL:CSSR_BACSU (SWALL:O32192) (225 aa) fasta scores: E(): 1.1e-40, 50.89 id in 224 aa.
       0.444
CBO2766A
Putative glucose translocase.
  
  
 0.419
cssS
Two-component sensor kinase; Similar to Bacillus subtilis sensor protein CssS or bsu33020 SWALL:CSSS_BACSU (SWALL:O32193) (451 aa) fasta scores: E(): 9e-33, 30.17 38d in 464 aa.
       0.414
CBO2702
Putative glycosyl transferase.
 
  
 0.406
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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