STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0300Similar to Clostridium tetani transcriptional regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941) (329 aa) fasta scores: E(): 4.8e-11, 27.5 38d in 349 aa. (345 aa)    
Predicted Functional Partners:
CBO0685
AraC-family transcriptional regulator.
  
     0.761
CBO0623
AraC-family transcriptional regulator.
  
     0.683
CBO1198
AraC-family transcriptional regulator.
 
   0.682
CBO1044
AraC-family transcriptional regulator.
  
     0.660
CBO2078
Putative transmembrane protein.
 
     0.564
CBO0703
AraC-family transcriptional regulator.
  
     0.554
CBO2079
Putative transmembrane protein.
 
    0.554
CBO3575
AraC-family transcriptional regulator.
  
     0.552
CBO2077
Conserved hypothetical protein (partial); This CDS is similar to internal region of the listed database matches; was marked partial.
 
     0.548
CBO2279
ABC transporter, ATP-binding transmembrane protein.
 
    0.477
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.