STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuG1Similar to Bacillus subtilis ferrichrome transport system permease protein FhuG or bsu33300 SWALL:FHUG_BACSU (SWALL:P49937) (336 aa) fasta scores: E(): 3.4e-51, 41.39 id in 343 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (337 aa)    
Predicted Functional Partners:
fhuC1
Similar to Bacillus subtilis ferrichrome transport ATP-binding protein FhuC or bsu33290 SWALL:FHUC_BACSU (SWALL:P49938) (269 aa) fasta scores: E(): 3.1e-60, 63.29 id in 267 aa.
 
 
 0.976
fhuD1
Similar to Bacillus subtilis ferrichrome-binding protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU (SWALL:P37580) (315 aa) fasta scores: E(): 6.9e-19, 32.39 id in 321 aa. Also similar to CBO0306 35.144 38dentity in 313 aa overlap.
 
 
 0.940
fhuC2
Ferrichrome transport ATP-binding protein.
 
 
 0.904
fecE
Putative iron(III) dicitrate ABC transporter,ATP-binding protein.
 
 
 0.897
CBO0303
Putative iron(III) transport system, ATP-binding protein; Similar to Streptococcus agalactiae FhuC fhuC SWALL:Q8VQV6 (EMBL:AF452237) (264 aa) fasta scores: E(): 5.2e-26, 31.9 38d in 257 aa, and to Clostridium tetani putative hemin transport system ATP-binding protein fece fece or ctc00962 SWALL:Q896N8 (EMBL:AE015939) (252 aa) fasta scores: E(): 4.8e-47, 55.15 38d in 252 aa.
 
 
 0.894
CBO1339
Putative iron ABC transporter, ATP-binding protein.
 
 
 0.894
CBO2896
Iron compounds ABC transporter, ATP-binding protein.
 
 
 0.891
fhuB1
Similar to Bacillus subtilis ferrichrome transport system permease protein FhuB or bsu33310 SWALL:FHUB_BACSU (SWALL:P49936) (384 aa) fasta scores: E(): 2.1e-53, 46.52 id in 331 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.856
CBO1337
Putative iron ABC transporter, substrate-binding protein.
 
 
 0.855
CBO0306
Similar to Bacillus subtilis ferrichrome-binding protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU (SWALL:P37580) (315 aa) fasta scores: E(): 5.4e-25, 31.73 id in 312 aa. Also similar to CBO0310 35.144 38dentity in 313 aa overlap.
 
 
 0.816
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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