STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0352Two-component response regulator; Similar to Bacillus subtilis alkaline phosphatase synthesis transcriptional regulatory protein PhoP or bsu29110 SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta scores: E(): 1.6e-34, 46.72 38d in 229 aa. (228 aa)    
Predicted Functional Partners:
CBO0353
Two-component sensor kinase; Similar to Clostridium tetani alkaline phosphatase synthesis sensor protein phor or ctc01951 SWALL:Q892Y2 (EMBL:AE015942) (471 aa) fasta scores: E(): 9.7e-94,56.86 38d in 459 aa.
 
 0.980
CBO0336
Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id in 610 aa.
 
 0.868
CBO0340
Two-component sensor kinase; Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 1.1e-45,34.81 38d in 586 aa.
 
 0.825
CBO0787
Two component sensor kinase.
  
 
 0.824
CBO3349
Two-component sensor kinase.
 
 
 0.802
CBO0608
Two-component sensor kinase.
 
   0.801
CBO2284
Two-component sensor kinase.
   0.788
CBO1120
Two-component sensor kinase.
   0.781
CBO0780
Two component sensor kinase.
  
   0.774
CBO1922
Two-component sensor kinase.
 
 
 0.764
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.