Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0353Two-component sensor kinase; Similar to Clostridium tetani alkaline phosphatase synthesis sensor protein phor or ctc01951 SWALL:Q892Y2 (EMBL:AE015942) (471 aa) fasta scores: E(): 9.7e-94,56.86 38d in 459 aa. (464 aa)    
Predicted Functional Partners:
CBO0352
Two-component response regulator; Similar to Bacillus subtilis alkaline phosphatase synthesis transcriptional regulatory protein PhoP or bsu29110 SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta scores: E(): 1.6e-34, 46.72 38d in 229 aa.
 
 0.980
CBO0354
Putative lipoprotein; Similar to Clostridium tetani conserved protein ctc01950 SWALL:Q892Y3 (EMBL:AE015942) (509 aa) fasta scores: E(): 4.1e-53, 35.15 38d in 512 aa.
 
     0.910
CBO0506
Putative two-component response regulator.
 
 
 0.889
CBO1041
Two-component response regulator.
 
 0.806
CBO1968
Two-component response regulator.
 
 
 0.746
CBO1613
Two-component response regulator.
 
 
 0.734
CBO0607
Two-component response regulator.
 
 
 0.714
CBO2285
Two-component response regulator.
 
 
 0.713
CBO2527
Two-component response regulator.
 
 0.706
CBO3349A
Two-component response regulator.
 
 
 0.703
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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