STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0366Two-component sensor kinase; Similar to Enterococcus faecalis VansE SWALL:Q93A42 (EMBL:AF430807) (357 aa) fasta scores: E(): 1.1e-25,32.16 38d in 370 aa. (492 aa)    
Predicted Functional Partners:
CBO0365
Two-component response regulator; Similar to Enterococcus faecium regulatory protein VanR vanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta scores: E(): 2.2e-41, 51.94 38d in 231 aa.
 
 0.978
CBO3349A
Two-component response regulator.
 
 0.849
CBO0610
Two-component response regulator.
 
 0.834
CBO0364
Putative phosphatase; Similar to Clostridium tetani ser/thr and tyr protein phosphatase ctc02044 SWALL:Q892P9 (EMBL:AE015943) (208 aa) fasta scores: E(): 6e-36, 43.35 38d in 203 aa.
 
   
 0.830
CBO1613
Two-component response regulator.
 
 0.817
CBO2285
Two-component response regulator.
 
 0.816
CBO3543
Two-component response regulator.
 
 0.809
CBO2527
Two-component response regulator.
 
 0.805
CBO2307
Two-component response regulator.
 
 0.804
CBO1041
Two-component response regulator.
 
 0.794
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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