STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0396Putative exported protein; Similar to Clostridium acetobutylicum hypothetical protein Cac0952 SWALL:Q97KG7 (EMBL:AE007610) (114 aa) fasta scores: E(): 1.3e-08, 32.99 38d in 97 aa. (115 aa)    
Predicted Functional Partners:
CBO0397
Putative metal dependent phosphohydrolase; Similar to Clostridium tetani conserved protein ctc00529 SWALL:Q898D3 (EMBL:AE015937) (357 aa) fasta scores: E(): 7.6e-85, 63.17 38d in 353 aa.
       0.547
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.