STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0463Putative membrane protein; Similar to Clostridium tetani conserved protein ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta scores: E(): 1.1e-32, 47.1 38d in 276 aa. (278 aa)    
Predicted Functional Partners:
CBO0462
Putative membrane protein; Similar to Clostridium tetani lema-like protein LemA or ctc00358 SWALL:Q898T4 (EMBL:AE015937) (191 aa) fasta scores: E(): 3.8e-39, 59.57 38d in 188 aa.
 
    0.958
flhB
Flagellar biosynthetic protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
 
 0.858
CBO1505
Putative oxidoreductase.
  
   0.797
CBO0482
Similar to Bacillus halodurans hypothetical protein Bh1562 SWALL:Q9KCK9 (EMBL:AP001512) (268 aa) fasta scores: E(): 4.7e-46, 45.14 38d in 268 aa.
    
   0.796
CBO0461
Similar to Clostridium tetani transcriptional regulatory protein ctc00684 SWALL:Q897P7 (EMBL:AE015938) (481 aa) fasta scores: E(): 5.3e-110, 62 38d in 479 aa.
       0.596
CBO3211
Conserved hypothetical protein.
  
  
 0.561
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.