STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0471Hypothetical protein; No significant database matches. (44 aa)    
Predicted Functional Partners:
CBO0470
Putative membrane protein; Similar to Bacillus cereus hypothetical membrane spanning protein bc2987 SWALL:Q813G4 (EMBL:AE017007) (160 aa) fasta scores: E(): 0.00041, 30 38d in 170 aa.
       0.467
CBO0469
Putative DNA-binding protein; Similar to Bacillus cereus transcriptional regulator, cro/ci family bc2181 SWALL:Q81E15 (EMBL:AE017005) (75 aa) fasta scores: E(): 1.6e-16, 73.52 id in 68 aa.
       0.438
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.