STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0484Putative exported protein; Similar to Clostridium tetani conserved protein ctc00791 SWALL:Q897E9 (EMBL:AE015938) (335 aa) fasta scores: E(): 1.1e-77, 64.47 38d in 335 aa. (334 aa)    
Predicted Functional Partners:
CBO0485
Similar to Clostridium tetani conserved protein ctc00792 SWALL:Q897E8 (EMBL:AE015938) (343 aa) fasta scores: E(): 1e-48, 40.81 38d in 343 aa.
 
    0.956
CBO1232
Putative exported protein.
 
    0.825
CBO0483
Conserved hypothetical protein; Similar to Clostridium perfringens probable phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8 (EMBL:AP003191) (459 aa) fasta scores: E(): 2.2e-118, 69.71 38d in 459 aa.
       0.494
CBO2537
Putative glycosyl transferase.
  
     0.481
CBO1816
Putative glycosyltransferase.
  
     0.480
CBO3440
TPR-repeat-containing protein.
  
     0.473
sagI
Putative cytolysin ABC transporter; Similar to Streptococcus iniae SagI sagI SWALL:Q8GP10 (EMBL:AF465842) (372 aa) fasta scores: E(): 2.3e-37, 32.04 38d in 362 aa.
 
    0.451
CBO1382
Putative ABC transporter, permease protein.
  
    0.404
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.