Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctpMPutative arylsulfatase regulatory protein. (450 aa)    
Predicted Functional Partners:
scfA
Hypothetical protein; No significant database matches.
 
 
   0.802
CBO0581
Conserved hypothetical protein.
       0.796
CBO0582
Conserved hypothetical protein.
       0.655
CBO0583
ABC transporter ATP-binding/permease protein.
 
     0.640
CBO2132
Conserved hypothetical protein.
  
     0.608
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
   
    0.498
CBO3250
Putative ABC transporter, permease protein; 5 probable transmembrane helices predicted for CBO3249 by TMHMM2.0 at aa 28-46, 89-106, 119-138, 143-162 and 183-205.
  
     0.438
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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