Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0593Putative sulfatase. (630 aa)    
Predicted Functional Partners:
CBO0127
Putative cell wall synthesis protein; Similar to Clostridium tetani 1,2-diacylglycerol 3-glucosyltransferase ctc00289 SWALL:Q898Z7 (EMBL:AE015936) (389 aa) fasta scores: E(): 1.7e-81,59.38 38d in 389 aa, and to Clostridium acetobutylicum predicted udp-glucuronosyltransferase, ypfp b/subtilis ortholog cac2897 SWALL:Q97F56 (EMBL:AE007787) (384 aa) fasta scores: E(): 4.3e-80, 59.53 38d in 383 aa.
  
 
 0.919
CBO2861
Putative sulfatase.
  
  
 
0.904
CBO3350
Putative lipoprotein.
  
     0.450
CBO2766A
Putative glucose translocase.
  
  
 0.449
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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