STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuD2Iron-uptake system binding protein. (329 aa)    
Predicted Functional Partners:
fhuB2
Ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.910
fhuG2
Ferrichrome transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.906
fhuC2
Ferrichrome transport ATP-binding protein.
 
 
 0.903
fhuC1
Similar to Bacillus subtilis ferrichrome transport ATP-binding protein FhuC or bsu33290 SWALL:FHUC_BACSU (SWALL:P49938) (269 aa) fasta scores: E(): 3.1e-60, 63.29 id in 267 aa.
 
 
 0.858
nifE1
Nitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.822
nifE2
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE.
 
     0.781
fhuB1
Similar to Bacillus subtilis ferrichrome transport system permease protein FhuB or bsu33310 SWALL:FHUB_BACSU (SWALL:P49936) (384 aa) fasta scores: E(): 2.1e-53, 46.52 id in 331 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.732
CBO0303
Putative iron(III) transport system, ATP-binding protein; Similar to Streptococcus agalactiae FhuC fhuC SWALL:Q8VQV6 (EMBL:AF452237) (264 aa) fasta scores: E(): 5.2e-26, 31.9 38d in 257 aa, and to Clostridium tetani putative hemin transport system ATP-binding protein fece fece or ctc00962 SWALL:Q896N8 (EMBL:AE015939) (252 aa) fasta scores: E(): 4.8e-47, 55.15 38d in 252 aa.
 
 
 0.717
CBO0685
AraC-family transcriptional regulator.
 
    0.695
fhuG1
Similar to Bacillus subtilis ferrichrome transport system permease protein FhuG or bsu33300 SWALL:FHUG_BACSU (SWALL:P49937) (336 aa) fasta scores: E(): 3.4e-51, 41.39 id in 343 aa; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.690
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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