STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0705Similar to Clostridium acetobutylicum hypothetical protein Cac1490 cac1490 SWALL:Q97IZ6 (EMBL:AE007660) (57 aa) fasta scores: E(): 1.5e-07, 56.25 38d in 48 aa, and to the C-terminal region of Lumpy skin disease virus early transcription factor small subunit lw017 SWALL:Q91T35 (EMBL:AF336128) (176 aa) fasta scores: E(): 8.5, 25.8 38d in 62 aa. (54 aa)    
Predicted Functional Partners:
CBO0704
Hypothetical protein; No significant database matches.
       0.443
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.