STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0709Putative drug resistance ABC transporter,ATP-binding protein. (243 aa)    
Predicted Functional Partners:
CBO0710
Putative drug resistance ABC-transporter,membrane protein.
 
  
 0.972
CBO0708
MerR-family transcriptional regulator.
 
     0.926
CBO0558A
GntR-family transcriptional regulator.
  
    0.541
CBO0587
ABC transporter, ATP-binding protein.
 
    
0.530
CBO0544
Putative acetyltransferase.
  
     0.528
CBO0711
Putative drug resistance ABC transporter.
 
     0.521
CBO2245
MerR family regulatory protein.
 
     0.500
CBO0663
Conserved hypothetical protein.
  
     0.499
CBO0443
Similar to Methanosarcina mazei conserved protein mm1395 SWALL:Q8PX27 (EMBL:AE013374) (154 aa) fasta scores: E(): 8e-25, 48.36 38d in 153 aa.
 
    0.459
CBO1995
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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